From: Assisted clustering of gene expression data using ANCut
Parameters | M accuracy | M stability | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
n | p | q | q 0 | ANCut | NCut | K-means | Spec. | ANCut | NCut | K-means | Spec. |
200 | 500 | 250 | 3 | 49.9% | 49.9% | 50% | 49.9% | 31.2% | 32.6% | 47.9% | 33.7% |
200 | 500 | 250 | 6 | 41.6% | 42.4% | 48.5% | 46.2% | 24.1% | 27.1% | 46.3% | 37.9% |
200 | 500 | 500 | 3 | 49.2% | 49.5% | 50% | 50% | 31.2% | 32.1% | 47.9% | 33.7% |
200 | 500 | 500 | 6 | 41.9% | 43.9% | 48.7% | 44.1% | 24.3% | 20.1% | 46.6% | 17.9% |
400 | 500 | 250 | 3 | 46.3% | 47.6% | 49.9% | 48.8% | 28.9% | 30.1% | 47.9% | 41.6% |
400 | 500 | 250 | 6 | 33.6% | 34.5% | 39.4% | 40.4% | 15.2% | 19.3% | 17.9% | 16.2% |
400 | 500 | 500 | 3 | 46.2% | 48% | 49.8% | 47.1% | 28.3% | 31.3% | 47.9% | 31.4% |
400 | 500 | 500 | 6 | 34.2% | 34% | 35.3% | 33.9% | 16.5% | 17.4% | 19.6% | 14.1% |
200 | 800 | 400 | 3 | 48.6% | 49.3% | 49.9% | 49.3% | 32.8% | 35.1% | 47.6% | 45.9% |
200 | 800 | 400 | 6 | 42.3% | 43.3% | 46.3% | 44.3% | 29.3% | 30.1% | 41.8% | 33.8% |
200 | 800 | 800 | 3 | 48.6% | 49% | 49.9% | 48.1% | 32.5% | 36.7% | 47.9% | 29.4% |
200 | 800 | 800 | 6 | 42.1% | 39.3% | 46.5% | 43.9% | 29.4% | 24.1% | 42.8% | 26.5% |
400 | 800 | 400 | 3 | 46.5% | 48.3% | 49.8% | 47.4% | 33.3% | 45.2% | 48.5% | 47.5% |
400 | 800 | 400 | 6 | 37.5% | 34.4% | 40.2% | 37.2% | 23.6% | 22.1% | 27.9% | 20.7% |
400 | 800 | 800 | 3 | 46.9% | 48.5% | 49.7% | 48.1% | 31% | 30% | 48.1% | 31.5% |
400 | 800 | 800 | 6 | 37.7% | 36.1% | 40% | 36.2% | 24.4% | 23.6% | 27.2% | 29.1% |