Skip to main content

Table 2 Sequencing, de novo assembly and annotation statistics

From: The purplish bifurcate mussel Mytilisepta virgata gene expression atlas reveals a remarkable tissue functional specialization

Digestive gland trimmed reads 48,106,544
Posterior adductor muscle trimmed reads 46,456,019
Gills trimmed reads 49,760,348
Mantle rim trimmed reads 53,492,730
Foot trimmed reads 86,035,069
Number of contigs 49,501
Longest contigs 9778 nt
Average contig length 679 nt
N50 1046
Contigs longer than 5Kb 68
Complete BUSCOs 66%
Fragmented BUSCOs 10%
Absent BUSCOs 24%
Predicted protein-coding contigs (>100 aa) 29%
GO cellular component annotation rate 19%
GO molecular function annotation rate 17%
GO biological process annotation rate 17%
PFAM annotation rate 23%
Mytiloid innovations (protein coding) 2%