Table 1 Results of pan-cancer screening for prognostic biomarkers
Cancer type | Mutation analysis | RPPA analysis | mRNA analysis | ||||||
|---|---|---|---|---|---|---|---|---|---|
Samples (N) | Genes (N) | Genes (N) (chi-square test, FDR < 0.05) | Samples (N) | Genes (N) | Genes (N) (log-rank test, FDR < 0.05) | Samples (N) | Genes (N) | Genes (N) (log-rank test, FDR < 0.05) | |
BLCA | 92 | 63 | 0 | 110 | 17 | 2 | 110 | 9 | 0 |
BRCA | 463 | 67 | 6 | 691 | 31 | 10 | 691 | 20 | 0 |
COADREAD | 222 | 62 | 0 | 185 | 2 | 0 | 185 | 6 | 0 |
GBM | 284 | 31 | 6 | 72 | 32 | 1 | 72 | 14 | 1 |
HNSC | 159 | 50 | 4 | 206 | 17 | 0 | 206 | 12 | 0 |
KIRC | 414 | 32 | 1 | 436 | 101 | 85 | 436 | 89 | 84 |
LUAD | 116 | 59 | 0 | 223 | 15 | 0 | 223 | 30 | 1 |
LUSC | 174 | 173 | 6 | 167 | 15 | 0 | 167 | 12 | 0 |
OV | 315 | 14 | 1 | 201 | 18 | 0 | 201 | 7 | 0 |
UCEC | 247 | 472 | 31 | 300 | 26 | 3 | 300 | 39 | 5 |