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Table 5 The multi-breed prediction accuracy and bias of GBLUP, BayesR, and HyB_BR on SEQ data related to traits affected by heat tolerance

From: Application of a Bayesian non-linear model hybrid scheme to sequence data for genomic prediction and QTL mapping

 

Holstein and Jersey reference Prediction on Holstein bulls

Fat

Milk

Protein

Acc.

Bias

Acc.

Bias

Acc.

Bias

GBLUP

0.35

1.47

0.24

0.84

0.32

1.24

BayesR

0.35

1.05

0.29

0.88

0.33

0.92

HyB_BR

0.35

1.05

0.28

0.86

0.33

1.01

 

Holstein and Jersey reference Prediction on Jersey bulls

Fat

Milk

Protein

Acc.

Bias

Acc.

Bias

Acc.

Bias

GBLUP

0.33

1.25

0.37

1.11

0.35

0.72

BayesR

0.27

0.89

0.46

0.89

0.35

0.76

HyB_BR

0.27

0.88

0.46

0.89

0.35

0.77

  1. The bulls and cows from two breeds of Holstein and Jersey are used as the reference set to predict Holstein bulls and Jersey bulls separately