From: Omni-PolyA: a method and tool for accurate recognition of Poly(A) signals in human genomic DNA
Variant | Size | Error rate (%) | ||||
---|---|---|---|---|---|---|
DPS model | DNN model | Omni-PolyA model | ||||
DPS feature set | DPS feature set | DPS feature set | Omni-PolyA feature set | Omni-PolyA feature set PAS-weak data pooled | ||
AATAAA | 5190 | 23.72 | 16.80 | 14.02 | 14.20 | 14.20 |
ATTAAA | 2400 | 16.63 | 15.50 | 14.00 | 12.50 | 12.50 |
AAGAAA | 1250 | 14.00 | 16.88 | 11.84 | 10.80 | 11.36 |
AAAAAG | 1230 | 8.05 | 8.29 | 4.87 | 5.85 | 5.45 |
AATACA | 880 | 20.00 | 17.72 | 13.52 | 14.09 | 13.52 |
TATAAA | 780 | 18.08 | 21.28 | 20.38 | 14.74 | 13.85 |
ACTAAA | 690 | 23.33 | 23.04 | 19.56 | 16.23 | 14.49 |
AGTAAA | 670 | 19.55 | 22.98 | 16.71 | 14.77 | 13.13 |
GATAAA | 460 | 21.74 | 16.73 | 13.69 | 10.65 | 8.48 |
AATATA | 410 | 18.05 | 20.00 | 16.82 | 15.85 | 13.41 |
CATAAA | 410 | 20.00 | 26.34 | 24.14 | 14.39 | 14.39 |
AATAGA | 370 | 18.38 | 15.40 | 12.93 | 12.97 | 11.62 |
Average | Â | 19.25 | 17.07 | 14.08 | 12.99 | 12.50 |