Fig. 5
From: Isolation of ripening-related genes from ethylene/1-MCP treated papaya through RNA-seq
Candidate gene expression levels revealed by RT-qPCR and RNA-seq. The heat map shows FPKM values for the 18 selected candidate genes. Sample names are displayed below the heat maps. Color scale indicates fold changes of gene expression. The bar charts show the RT-qPCR results. RT-qPCR was performed with primer sets in Table 2. CpEIF was used as the reference gene. Error bars on each column indicate SDs from three replicates. Different lower case letters above bars indicate statistically significant differences at P < 0.05 (one-way ANOVA, Duncan’s tests). Different letters indicate significant differences between groups, while same letters represent no significant difference. The genes and the gene_id are as follows: XTH30 (evm.TU.supercontig_208.1), GLU-B (evm.TU.supercontig_80.123), PMIS (evm.TU.supercontig_3.77), PL (evm.TU.supercontig_5.270), EGase (evm.TU.supercontig_2.231), EXPA (evm.TU.supercontig_1.419), CHY-B (evm.TU.supercontig_107.106), CHLM (evm.TU.supercontig_13.164), FER1 (evm.TU.supercontig_5.220), AIR3 (evm.TU.supercontig_12.94), CPSP (evm.TU.supercontig_4.28), SERPIN (evm.TU.contig_38010), HAB1 (evm.TU.supercontig_25.85), GH3.1 (evm.TU.supercontig_292.1), ERS (evm.TU.supercontig_151.32), EBF2 (evm.TU.supercontig_750.1), NAC (evm.TU.supercontig_1.48), SAG (evm.TU.supercontig_99.60)