Skip to main content

Table 3 A list of the carbohydrate-activated enzymes (CAZy) identified in the genome of Phomopsis longicolla isolate MSPL 10–6

From: Analysis of the genome sequence of Phomopsis longicolla: a fungal pathogen causing Phomopsis seed decay in soybean

CAZy familya

Substrate

Description

EC

Copy number

CE1

Hemicellulose (xylan)

Acetyl xylan esterase

3.1.1.72

33

Feruloyl esterase

3.1.1.73

CE2

Hemicellulose (xylan)

Acetyl xylan esterase

3.1.1.72

2

CE3

Hemicellulose (xylan)

Acetyl xylan esterase

3.1.1.72

10

CE4

Hemicellulose (xylan)

Acetyl xylan esterase

3.1.1.72

8

CE5

Hemicellulose (xylan)

Acetyl xylan esterase

3.1.1.72

18

Cutin

Cutinase

3.1.1.74

CE7

Hemicellulose (xylan)

Acetyl xylan esterase

3.1.1.72

1

CE8

Pectin (homogalacturonan)

Pectin methylesterase

3.1.1.11

6

CE9

Polysaccharides

N-acetylglucosamine 6-phosphate

3.5.1.25

1

Deacetylase

3.5.1.80

CE10

Polysaccharides

Arylesterase

3.1.1.-

105

CE12

Pectin(homogalacturonan, rhamnogalacturonan I)

Pectin acetylesterase

3.1.1.-

5

Hemicellulose

Acetyl pectin esterase

3.1.1.72

CE14

Polysaccharides

N-acetylglucosaminylphosphatidy-linositol deacetylase

3.5.1.89

1

CE15

Polysaccharides

4-O-methyl-glucuronoyl methylesterase

3.1.1.-

2

CE16

Polysaccharides

Acetylesterase

3.1.1.6

7

GH1

Cellulose

β-glucosidase

3.2.1.21

6

Hemicellulose (xylan, xyloglucan)

β-xylosidase

3.2.1.37

Pectin (rhamnogalacturonan I)

β-galactosidase

3.2.1.23

GH2

Hemicellulose (xylan, xyloglucan, galactomannan)

β-mannosidase

3.2.1.25

10

Pectin (rhamnogalacturonan I)

β-glucuronidase

3.2.1.31

GH3

Cellulose

β-glucosidase

3.2.1.21

23

Hemicellulose

β-xylosidase

3.2.1.37

(xylan, xyloglucan)

 

3.2.1.74

Pectin

exo-β-1,4-glucanase

 

GH5

Cellulose

endo-β-1,4-glucanase

3.2.1.4

27

Hemicellulose (galactomannan)

endo-β-1,4-xylanase

3.2.1.8

Pectin (rhamnogalacturonan I)

exo-β-1,4-glucanase

3.2.1.74

GH6

Cellulose

Cellobiohydrolase

3.2.1.91

4

endo-β-1,4-glucanase

3.2.1.4

GH7

Cellulose

endo-β-1,4-glucanase

3.2.1.4

9

Cellobiohydrolase

3.2.1.176

GH9

Cellulose

Cellusae

-

1

GH10

Hemicellulose (xylan)

endo-β-1,4-xylanase

3.2.1.8

7

GH11

Hemicellulose (xylan)

endo-β-1,4-xylanase

3.2.1.8

4

GH12

Cellulose

endo-β-1,4-glucanase

3.2.1.4

6

Hemicellulose (xyloglucan)

Xyloglucanase

3.2.1.151

GH13

Polysaccharides

α-amylase

3.2.1.1

17

GH15

Polysaccharides

Glucoamylase

3.2.1.3

1

GH16

Hemicellulose

Xyloglucanase

3.2.1.151

21

GH17

Polysaccharides

endo-1,3-β-glucosidase

3.2.1.39

7

GH18

Polysaccharides

Chitinase

3.2.1.14

27

endo-β-N-acetylglucosaminidase

3.2.1.96

GH20

Polysaccharides

β-hexosaminidase

3.2.1.52

3

GH26

Polysaccharides

beta-mannanase

3.2.1.78

1

GH27

Hemicellulose (xylan, xyloglucan, galactomannan)

α-galactosidase

3.2.1.22

2

α-N-acetylgalactosaminidase

3.2.1.49

GH28

Pectin (homogalacturonan, rhamnogalacturonan I)

Polygalacturonase

3.2.1.15

21

GH29

Oligosaccharides

alpha-L-fucosidase

3.2.1.51

4

GH30

Polysaccharides

Glucosylceramidase

3.2.1.45

4

GH31

Hemicellulose (xyloglucan)

α-xylosidase

3.2.1.177

7

GH32

Sucrose

Invertase

3.2.1.26

6

GH33

Oligosaccharides

exo-α-sialidase

3.2.1.18

1

GH35

Hemicellulose (xylan, xyloglucan, galactomannan)

β-galactosidase

3.2.1.23

7

Pectin (rhamnogalacturonan I)

exo-β-1,4-galactanase

3.2.1.-

GH36

Hemicellulose (xylan, xyloglucan, galactomannan)

α-galactosidase

3.2.1.22

1

α-N-acetylgalactosaminidase

3.2.1.49

GH37

Trehalose

α,α-trehalase

3.2.1.28

2

GH38

Oligosaccharides

α-mannosidase

3.2.1.24

1

GH39

Oligosaccharides

alpha-L-iduronidase

3.2.1.76

2

GH42

Oligosaccharides

beta-galactosidase

3.2.1.23

1

GH43

Hemicellulose (xylan)

β-xylosidase

3.2.1.37

40

Pectin (rhamnogalacturonan I)

α-L-arabinofuranosidase

3.2.1.55

GH45

Cellulose

endo-β-1,4-glucanase

3.2.1.4

2

GH47

Oligosaccharides

α-mannosidase

3.2.1.113

12

GH51

Cellulose

endo-β-1,4-glucanase

3.2.1.4

4

Hemicellulose (xylan,xyloglucan)

β-xylosidase

3.2.1.37

GH53

Pectin (rhamnogalacturonan I)

endo-β-1,4-galactanase

3.2.1.89

4

GH54

Pectin

alpha-L-arabinofuranosidase

3.2.1.55

1

GH55

Polysaccharides

endo-1,3-β-glucosidase

3.2.1.39

6

GH62

Polysaccharides

alpha-L-arabinofuranosidase

3.2.1.55

1

GH63

Oligosaccharides

α-glucosidase

3.2.1.106

4

GH64

Polysaccharides

endo-1,3-β-glucosidase

3.2.1.39

4

GH65

Polysaccharides

alpha,alpha-trehalase

3.2.1.28

2

GH67

Polysaccharides

alpha-glucuronidase

3.2.1.139

1

GH71

Polysaccharides

α-1,3-glucanase

3.2.1.59

9

GH72

Polysaccharides

β-1,3-glucanosyltransglycosylase

2.4.1.-

10

GH74

Cellulose

endo-β-1,4-glucanase

3.2.1.4

11

Hemicellulose (xyloglucan)

Xyloglucanase

3.2.1.151

GH76

Oligosaccharides

α-1,6-mannanase

3.2.1.101

14

GH78

Pectin

α-L-rhamnosidase

3.2.1.40

14

GH79

Pectin (rhamnogalacturonan I)

β-glucuronidase

3.2.1.31

9

GH81

Polysaccharides

endo-1,3-β-glucosidase

3.2.1.39

2

GH88

Polysaccharides

β-glucuronyl hydrolase

3.2.1.-

1

GH92

Oligosaccharides

Mannosyl-oligosaccharide alpha-1,2-mannosidase

3.2.1.113

8

GH93

Pectin (rhamnogalacturonan I)

exo-α-L-1,5-arabinanase

3.2.1.-

7

GH94

Cellulose

cellobiose phosphorylase

2.4.1.20

1

GH95

Hemicellulose (xyloglucan)

α-1,2-L-fucosidase

3.2.1.63

3

GH105

Pectin

Rhamnogalacturonyl hydrolase

3.2.1.172

8

GH106

Polysaccharides

alpha-L-rhamnosidase

3.2.1.40

4

GH109

Polysaccharides

α-N-acetylgalactosaminidase

3.2.1.49

20

GH114

Polysaccharides

endo-α-1,4-polygalactosaminidase

3.2.1.109

3

GH115

Hemicellulose (xylan)

Xylan α-1,2-glucuronidase

3.2.1.131

4

GH125

Oligosaccharides

exo-α-1,6-mannosidase

3.2.1.-

4

GH127

Oligosaccharides

β-L-arabinofuranosidase

3.2.1.185

3

GH128

Polysaccharides

endo-1,3-β-glucosidase

3.2.1.39

6

GH131

Cellulose

exo-β-1,3/1,4/1,6-glucanase

3.2.1.-

8

Hemicellulose

  

GH132

Polysaccharides

Activity on β-1,3glucan

–

2

GH133

Polysaccharides

amylo-α-1,6-glucosidase

3.2.1.33

1

GH134

Polysaccharides

endo-β-1,4-mannanase

3.2.1.78

1

GH135

Polysaccharides

α-1,4-galactosaminogalactan hydrolase

3.2.1.-

4

PL1

Pectin (homogalacturonan)

Pectate lyase

4.2.2.2

21

PL3

Pectin

Pectate lyase

4.2.2.2

10

PL4

Pectin (rhamnogalacturonan I)

Rhamnogalacturonan lyase

4.2.2.-

8

PL9

Pectin

Pectate lyase

4.2.2.2

2

Exopolygalacturonate lyase

4.2.2.9

PL11

Pectin

Rhamnogalacturonan endolyase

4.2.2.23

2

PL22

Pectin

Oligogalacturonate lyase

4.2.2.6

1

PL24

Pectin

Ulvan lyase

4.2.2.-

1

  1. a CE Carbohydrate esterases, GH Glycoside hydrolases, PL polysaccharide lyases