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Table 4 Classes of auxiliary activity (AA), carbohydrate-binding module (CBM), and glycosyl-transferase (GT) enzymes in the genome of Phomopsis longicolla isolate MSPL 10–6

From: Analysis of the genome sequence of Phomopsis longicolla: a fungal pathogen causing Phomopsis seed decay in soybean

CAZya family

Description

Copy Number

AA1

Multicopper oxidases

6

AA2

Lignin peroxidase

16

AA3

Glucose-methanol-choline (GMC) oxidoreductases

75

AA4

vanillyl-alcohol oxidase

7

AA5

radical-copper oxidases

3

AA6

1,4-benzoquinone reductases

1

AA7

Glucooligosaccharide oxidase

96

AA8

Iron reductase

7

AA9

Copper-dependent lytic polysaccharide monooxygenases

35

AA11

monooxygenase

10

AA12

The pyrroloquinoline quinone-dependent oxidoreductase activity was demonstrated for the CC1G_09525 protein of Coprinopsis cinerea

2

AA13

Monooxygenase

1

CBM1

Cellulose-binding

21

CBM6

Amylase

1

CBM13

Cellulose-binding

2

CBM18

Chitin-binding

12

CBM20

Starch-binding

6

CBM21

Starch-binding

1

CBM23

Mannan-binding

1

CBM24

Alpha-1,3-glucan (mutan)-binding

12

CBM32

Binding to LacNAc (beta-D-galactosyl-1,4-beta-D-N-acetylglucosamine)

2

CBM35

Xylan-binding

4

CBM37

Xylanase

1

CBM42

Binding to arabinofuranose

1

CBM43

Beta-1,3-glucan binding

2

CBM48

Amylase

1

CBM50

Peptidoglycan-binding (LysM domain)

37

CBM63

Cellulose-binding

1

CBM66

β-fructosidase

2

CBM67

L-rhamnose-binding

6

GT1

UDP-glucuronosyl-transferase

12

GT2

Cellulose/chitin synthase

16

GT3

Glycogen synthase

1

GT4

Sucrose synthase

7

GT5

Glycogen glucosyltransferase

4

GT8

Lipopolysaccharide glucosyl-transferase

6

GT15

α-1,2-mannosyl-transferase

5

GT17

β-1,4-N-acetyl-glucosaminyl-transferase

1

GT20

α,α-trehalose-phosphate synthase

3

GT21

Ceramide β-glucosyl-transferase

3

GT22

Man6GlcNAc2-PP-Dol α-1,2-mannosyl-transferase

4

GT24

Glycoprotein α-glucosyl-transferase

1

GT25

Lipopolysaccharide beta-1,4-galactosyltransferase

6

GT28

Digalactosyl-diacyl-glycerol- synthase

1

GT31

Fucose-specific β-1,3-N-acetylglucosaminyl-transferase

4

GT32

α-1,6-mannosyl-transferase

13

GT33

Chitobiosyl-diphosphodolichol β-mannosyl-transferase

1

GT34

α-1,2-galactosyl-transferase

2

GT35

Starch phosphorylase

1

GT39

Protein α-mannosylt-ransferase

3

GT41

Beta-N-acetylglucosaminyltransferase

1

GT48

1,3-β-glucan synthase

1

GT50

α-1,4-mannosyl-transferase

1

GT55

GDP-Man: mannosyl-3-phosphoglycerate synthase

2

GT57

α-1,3-glucosyl-transferase

3

GT58

Man5GlcNAc2-PP-Dol α-1,3-mannosyl-transferase

1

GT59

Glc2Man9GlcNAc2-PP-Dol α-1,2-glucosyl-transferase

1

GT61

Xylanase

1

GT62

α-1,2-mannosyl-transferase

3

GT66

dolichyl-diphospho-oligosaccharide-protein Glycotransferase

1

GT68

O-alpha-fucosyltransferase

1

GT69

α-1,3-mannosyl-transferase

4

GT71

α-mannosyl-transferase

8

GT76

α-1,6-mannosyl-transferase

1

GT77

Xylanase

1

GT90

Xylanase

9

GT92

Glycanase

1

  1. a Carbohydrate-activated enzymes