Table 5 Comparison of cytochrome P450 genes in different types among A. thaliana, B. rapa, and B. oleracea
Classification | Family | Arabidopsis thaliana | Brassica rapa | Brassica oleracea | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Different types | Different clans | Total P450s | P450s from WGD | P450s from TD | Total P450s | P450s from WGD | P450s from TD | Total P450s | P450s from WGD | P450s from TD | |
Non-A Type | CYP51 clan | CYP51 | 1 | 1 | 0 | 3 | 2 | 0 | 5 | 2 | 0 |
CYP72 clan | CYP714 | 2 | 2 | 2 | 1 | 1 | 0 | 2 | 2 | 0 | |
CYP715 | 1 | 1 | 0 | 4 | 2 | 2 | 3 | 2 | 2 | ||
CYP709 | 3 | 1 | 2 | 6 | 1 | 4 | 7 | 1 | 5 | ||
CYP72 | 9 | 6 | 8 | 18 | 11 | 13 | 6 | 5 | 4 | ||
CYP721 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | ||
CYP734 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | ||
CYP735 | 2 | 2 | 0 | 3 | 2 | 0 | 2 | 1 | 0 | ||
CYP710 clan | CYP710 | 4 | 1 | 4 | 3 | 2 | 2 | 2 | 1 | 0 | |
CYP711 clan | CYP711 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | |
CYP74 clan | CYP74 | 2 | 1 | 0 | 2 | 1 | 0 | 2 | 1 | 0 | |
CYP85 clan | CYP702 | 6 | 2 | 4 | 4 | 3 | 2 | 3 | 1 | 0 | |
CYP707 | 4 | 3 | 0 | 8 | 7 | 0 | 9 | 7 | 0 | ||
CYP708 | 4 | 0 | 0 | 6 | 0 | 2 | 3 | 0 | 0 | ||
CYP716 | 3 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | ||
CYP718 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | ||
CYP720 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | ||
CYP722 | 1 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | ||
CYP724 | 1 | 1 | 0 | 2 | 2 | 0 | 2 | 2 | 0 | ||
CYP85 | 2 | 0 | 0 | 4 | 0 | 0 | 4 | 0 | 0 | ||
CYP87 | 1 | 1 | 0 | 2 | 2 | 0 | 2 | 2 | 0 | ||
CYP88 | 2 | 2 | 0 | 2 | 2 | 0 | 2 | 2 | 0 | ||
CYP90 | 4 | 3 | 0 | 9 | 7 | 0 | 9 | 7 | 0 | ||
CYP86 clan | CYP704 | 3 | 2 | 0 | 5 | 3 | 2 | 4 | 3 | 0 | |
CYP86 | 11 | 9 | 2 | 13 | 13 | 0 | 14 | 13 | 0 | ||
CYP94 | 6 | 5 | 0 | 10 | 9 | 2 | 10 | 9 | 2 | ||
CYP96 | 14 | 3 | 4 | 30 | 3 | 18 | 32 | 2 | 17 | ||
CYP97 clan | CYP97 | 3 | 2 | 0 | 2 | 2 | 0 | 6 | 3 | 0 | |
Total non-A type | Â | Â | 94 | 53 | 28 | 143 | 79 | 47 | 136 | 71 | 30 |
A Type | CYP71 clan | CYP701 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 |
CYP703 | 1 | 0 | 0 | 2 | 0 | 0 | 2 | 0 | 0 | ||
CYP705 | 25 | 5 | 19 | 22 | 6 | 7 | 3 | 2 | 0 | ||
CYP706 | 8 | 2 | 6 | 10 | 3 | 2 | 9 | 4 | 2 | ||
CYP71 | 50 | 28 | 39 | 73 | 37 | 44 | 77 | 35 | 40 | ||
CYP712 | 2 | 2 | 0 | 2 | 2 | 0 | 2 | 2 | 0 | ||
CYP73 | 1 | 1 | 0 | 6 | 3 | 4 | 5 | 3 | 4 | ||
CYP75 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | ||
CYP76 | 9 | 5 | 8 | 12 | 4 | 7 | 12 | 5 | 7 | ||
CYP77 | 5 | 4 | 4 | 5 | 5 | 0 | 5 | 5 | 0 | ||
CYP78 | 6 | 5 | 0 | 11 | 8 | 2 | 12 | 9 | 0 | ||
CYP79 | 10 | 3 | 6 | 11 | 4 | 0 | 11 | 4 | 0 | ||
CYP81 | 18 | 12 | 10 | 32 | 23 | 20 | 37 | 23 | 23 | ||
CYP82 | 5 | 2 | 3 | 4 | 2 | 0 | 9 | 2 | 2 | ||
CYP83 | 2 | 1 | 0 | 6 | 1 | 2 | 6 | 1 | 2 | ||
CYP84 | 2 | 2 | 0 | 4 | 2 | 0 | 6 | 3 | 2 | ||
CYP89 | 7 | 1 | 3 | 4 | 1 | 2 | 3 | 1 | 0 | ||
CYP93 | 1 | 1 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | ||
CYP98 | 3 | 2 | 2 | 4 | 4 | 0 | 4 | 4 | 0 | ||
Total A-type | Â | Â | 157 | 78 | 100 | 211 | 108 | 90 | 207 | 106 | 82 |
Total | Â | Â | 251 | 131 (52.19%) | 128 (51%) | 354 | 187 (52.82%) | 137 (38.7%) | 343 | 177 (51.6%) | 112 (32.65%) |