Identification of microRNAs controlling hepatic mRNA levels for metabolic genes during the metabolic transition from embryonic to posthatch development in the chicken

Hicks, Julie A.; Porter, Tom E.; Liu, Hsiao-Ching

doi:10.1186/s12864-017-4096-5

Table 2 Number of predicted Lipid and Carbohydrate metabolic genes regulated by gga-let-7c, gga-miR-183 and gga-miR-20b

From: Identification of microRNAs controlling hepatic mRNA levels for metabolic genes during the metabolic transition from embryonic to posthatch development in the chicken

	Function	Number of predicted target genes
gga-miR-let-7c
Lipid Metabolism	synthesis of lipid	94
	synthesis of fatty acid	43
	synthesis of prostaglandin E2	22
	synthesis of prostaglandin	26
	synthesis of eicosanoid	31
	synthesis of terpenoid	36
	accumulation of lipid	47
	accumulation of ganglioside	6
	accumulation of sphingolipid	10
	accumulation of glycosphingolipid	9
	concentration of lipid	96
	concentration of phospholipid	28
	concentration of acylglycerol	43
	metabolism of prostaglandin	28
	metabolism of membrane lipid derivative	50
	metabolism of eicosanoid	34
	fatty acid metabolism	68
	biosynthesis of polyunsaturated fatty acids	33
	quantity of steroid	58
	degradation of ganglioside GM1	3
Carbohydrate Metabolism	quantity of carbohydrate	75
	concentration of D-glucose	47
	synthesis of carbohydrate	57
	synthesis of amino sugar	5
	synthesis of N-acetylneuraminic acid	3
	metabolism of carbohydrate	77
	metabolism of polysaccharide	32
	uptake of monosaccharide	39
	uptake of D-glucose	33
	uptake of carbohydrate	40
	transport of monosaccharide	24
	transport of carbohydrate	27
gga-miR-183
Lipid Metabolism	synthesis of lipid	65
	synthesis of fatty acid	32
	synthesis of phospholipid	20
	synthesis of eicosanoid	22
	synthesis of phosphatidic acid	14
	synthesis of prostaglandin	16
	metabolism of phospholipid	23
	metabolism of eicosanoid	23
	metabolism of membrane lipid derivative	32
	fatty acid metabolism	44
	metabolism of prostaglandin	17
	synthesis of lipid	14
Carbohydrate Metabolism	synthesis of phosphatidic acid	31
Carbohydrate Metabolism	synthesis of carbohydrate	65
gga-miR-20b
Lipid Metabolism	concentration of phospholipid	17
	concentration of lipid	52
	accumulation of ganglioside GM3	3
	accumulation of steroid	9
	accumulation of cholesterol	7
	synthesis of phospholipid	15
	synthesis of phosphatidic acid	12
	internalization of cholesterol	3
	beta-oxidation of lipid	8
Carbohydrate Metabolism	synthesis of phosphatidic acid	12
Carbohydrate Metabolism	quantity of carbohydrate	34

A predicted target gene may be present in more than one category

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ISSN: 1471-2164

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