Table 6 lncRNA-mediated PD-specific regulatory network

hsa-let-7a-5p

EIF2C2 (A), FSH (R), MYC (R), TRIM32 (A), E2F1 (A), E2F3 (A), LIN28 (R), LIN28B (R), NFKB1 (A), FLI1 (A), CEBPA

n410470

HRAS

hsa-let-7b-5p

EIF2C2 (A), MYC (R), TRIM32 (A), LIN28 (R), LIN28B (R), NFKB1 (A)

n339682, XIST, n410735, n410470

CBFB, IDI1, PSME3, SMARCC1

hsa-miR-103a-3p

n406427, n410632, n407114, n342319, n410010, n409184, n344659, TTC28-AS1, n338391, n339003, n342913, n407911, n409072, n409093

KPNA1, NSF

hsa-miR-125a-5p

EGR1, TLR2

n406658

DUSP3

hsa-miR-128

n410586, n406663, n408020

ATP6V1C1, GNB5, TXNIP, UBE2N

hsa-miR-15a-5p

c-myb (A), MYC (R), PRKCA (R), E2F1 (A), E2F3 (A), STAT5 (R)

n342249, n409656, n407055, n410632, n408096, n381271, n410476

HSPA1A, TPI1

hsa-miR-16-5p

MYC (R), E2F1 (A), E2F3 (A), STAT5 (R), NFKB1

n340911, n409656, n409286, n324249, n409199, n410507, n409266

ARHGDIA, CYCS, HSPA1A, KPNA1, L1CAM, LARP, NSF, PCMT1, PSME3, TPI1

hsa-miR-19b-3p

E2F1 (A), MYC (A), MYCN (A), NKX2–5 (A), TLX1 (A), TLX3 (A), ERS1 (A), STAT5 (A), SPI1 (R)

n336002, n341479, n409083, n339644, n333000, n339682, n333732, n337982, n340675

ATP6V1C1, LRP8, TOM1L2

hsa-miR-24-3p

BMP2 (A), TGFB1 (R), PDGF, RUNX2 (R), EGR1, ESR2 (A)

n340600, n409298

CTDSP2, NFKBIA, PSME3

hsa-miR-30a-5p

EGR1, ESR2 (R)

n336002, n409199, RP11-46 M12.1

ATP6V1C1, CBFB, KPNA1, NDE1, PRPF4B, YWHAZ

hsa-miR-34a-5p

MYC (R), TP53 (A), NR1H4 (R), CEBPA, NFKB1 (A), TP73 (A), SNAI1 (R), ZEB1 (R), E2F3

n406642, n385777, n408346, n341213, n408077, n410211, n335724

HSPA1A, KPNA1, LARP, SMARCC1, TXNIP

hsa-miR-7-5p

HoxD10 (A), SF2/ASF (A), FOXP3 (A)

n342007, n407908, n410669, n410711

GLS, PSME3, SNCA

hsa-miR-9-5p

IL1B (A), LPS (A), NFKB1 (A)(R), TLR2 (A), TLR4 (A), TLR7 (A), TLR8 (A), TLX (R), TNF (A), MYC (A), CREB1, REST

YTHDF3

OPTN