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Table 9 20 most significant SNPs in PD with their associated PD-specific miRNAs and genes

From: Biological networks in Parkinson’s disease: an insight into the epigenetic mechanisms associated with this disease

microRNAs

SNPs

Population

p-value

Chromosome

Gene

hsa-miR-34a-5p

rs3750625

YRI

5.00E-05

10:112,839,601

ADRA2A

hsa-miR-34b-5p

rs3750625

YRI

5.00E-05

10:112,839,601

hsa-miR-34c-5p

rs3750625

YRI

5.00E-05

10:112,839,601

hsa-miR-29b-2-5p

rs1697406

YRI

9.00E-05

1:21,904,267

ALPL

hsa-miR-9-5p

rs1697406

YRI

9.00E-05

1:21,904,267

hsa-miR-1225-5p

rs535860

YRI

1.00E-05

11:117,159,878

BACE1

hsa-miR-661

rs535860

YRI

1.00E-05

11:117,159,878

hsa-miR-647

rs13198420

CEU

7.00E-05

6:38,139,482

BTBD9

hsa-miR-661

rs12206712

CEU

8.00E-05

6:38,139,748

hsa-miR-455-3p

rs2762934

YRI

1.00E-05

20:52,771,261

CYP24A1

hsa-miR-632

rs3814309

CEU

4.00E-06

1:110,277,403

GSTM3

hsa-miR-199b-5p

rs16843618

YRI

1.00E-05

2:210,595,820

MAP2

hsa-miR-663b

rs3766286

YRI

3.00E-05

1:31,344,250

SDC3

hsa-let-7a-3p

rs1050955

YRI

1.00E-05

7:100,782,460

SERPINE1

hsa-let-7b-3p

rs1050955

YRI

1.00E-05

7:100,782,460

hsa-let-7f-1-3p

rs1050955

YRI

1.00E-05

7:100,782,460

hsa-miR-612

rs7242

YRI

4.00E-05

7:100,781,445

hsa-miR-224-5p

rs12281100

YRI

7.00E-05

11:36,506,773

TRAF6

hsa-miR-1226-3p

rs2242437

YRI

6.00E-07

19:1,065,563

HMHA1

hsa-miR-130a-5p

rs1042364

CEU

4.00E-05

4:100,045,574

ADH4

hsa-miR-29a-3p

rs1051881

YRI

9.00E-05

4:122,737,965

CCNA2

hsa-miR-29b-3p

rs1051881

YRI

9.00E-05

4:122,737,965

hsa-miR-29c-3p

rs1051881

YRI

9.00E-05

4:122,737,965

hsa-miR-1253

rs17085675

YRI

4.00E-05

5:95,727,664

PCSK1

hsa-miR-30b-3p

rs1045968

CEU

4.00E-05

16:29,826,365

PRRT2

hsa-miR-612

rs281437

YRI

4.00E-05

19:10,397,238

ICAM1

hsa-miR-663b

rs3829972

YRI

2.00E-05

12:6,929,018

CD4

hsa-miR-374a-5p

rs8067

YRI

1.00E-05

9:95,218,829

ASPN