Table 1 Correlation of NRTEs in their sequencing maize lines with TEs in B73
Features Compared | Whole Chromosomes | Chromosomal Arms | ||
|---|---|---|---|---|
ra | P-value | ra | P-value | |
Densities of LTR-RTs: TEM versus TST | 0.809 | 2.20 × 10−16 | 0.813 | 2.20 × 10−16 |
Densities of Gypsy-superfamily: TEM versus TST | 0.811 | 2.20 × 10−16 | 0.814 | 2.20 × 10−16 |
Densities of Copia-superfamily: TEM versus TST | 0.861 | 2.20 × 10−16 | 0.845 | 2.20 × 10−16 |
Densities of DNA TEs: TEM versus TST | 0.947 | 2.20 × 10−16 | 0.942 | 2.20 × 10−16 |
Densities of LTR-RTs in TEM versus accumulated LTR-RTs in B73 genome | −0.067 | 2.37 × 10−03 | −0.037 | 1.17 × 10−01 |
Densities of Gypsy-superfamily in TEM versus accumulated Gypsy-superfamily in B73 genome | 0.374 | 2.20 × 10−16 | 0.352 | 2.20 × 10−16 |
Densities of Copia-superfamily in TEM versus accumulated Copia-superfamily in B73 genome | 0.514 | 2.20 × 10−16 | 0.438 | 2.20 × 10−16 |
Densities of DNA TEs in TEM versus accumulated DNA TEs DNA in B73 genome | 0.301 | 2.20 × 10−16 | 0.257 | 2.20 × 10−16 |
Densities of LTR-RTs in TST versus accumulated LTR-RTs in B73 genome | −0.130 | 3.83 × 10−09 | −0.099 | 2.29 × 10−05 |
Densities of Gypsy-superfamily in TST versus accumulated Gypsy-superfamily in B73 genome | 0.348 | 2.20 × 10−16 | 0.332 | 2.20 × 10−16 |
Densities of Copia-superfamily in TST versus accumulated Copia-superfamily in B73 genome | 0.526 | 2.20 × 10−16 | 0.449 | 2.20 × 10−16 |
Densities of DNA TEs in TST versus accumulated DNA TEs in B73 genome | 0.309 | 2.20 × 10−16 | 0.264 | 2.20 × 10−16 |