Table 1 Cadmium-upregulated metal ion transporters identified in rice
Root | Shoot | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Fold Change | RPKM | Fold Change | RPKM | |||||||||||||
Cd_50 μM | Control | Cd_50 μM | Cd_50 μM | Control | Cd_50 μM | |||||||||||
Family | Transcript | Length | 1 h | 12 h | 24 h | 0 h | 1 h | 12 h | 24 h | 1 h | 12 h | 24 h | 0 h | 1 h | 12 h | 24 h |
HMA | Os02t0585200-01 | 797 | 94.7 | 280.1 | 313.2 | 5.0 | 568.4 | 1682.5 | 1881.4 | 2.5 | 4.3 | 4.6 | 3.8 | 11.3 | 19.9 | 21.0 |
Os03t0152000-01 | 1400 | 132.8 | 239.5 | 292.0 | 8.0 | 1191.9 | 2149.8 | 2621.0 | 1.4 | 4.3 | 4.8 | 3.2 | 5.0 | 17.3 | 19.2 | |
Os02t0585100-00 | 646 | 15.9 | 54.7 | 74.2 | 19.8 | 329.9 | 1135.6 | 1539.8 | 1.6 | 4.6 | 5.2 | 0.9 | 2.0 | 7.5 | 8.7 | |
Os02t0584800-01 | 716 | 15.4 | 64.8 | 70.1 | 7.0 | 122.0 | 515.7 | 557.4 | 1.0 | 4.4 | 3.9 | 5.2 | 5.5 | 26.5 | 23.1 | |
Os02t0584700-01 | 642 | 8.8 | 20.1 | 21.7 | 14.3 | 134.4 | 306.4 | 331.1 | 1.1 | 2.1 | 2.6 | 8.5 | 9.6 | 19.2 | 23.7 | |
Os04t0581800-01 | 566 | 1.0 | 8.1 | 17.5 | 0.7 | 0.7 | 12.8 | 28.9 | 0.9 | 1.2 | 1.0 | 0.3 | 0.2 | 0.6 | 0.3 | |
Os01t0976300-01 | 821 | 4.3 | 11.3 | 10.1 | 40.8 | 178.5 | 471.7 | 421.3 | 0.5 | 2.4 | 4.5 | 7.0 | 3.1 | 17.9 | 35.2 | |
Os03t0372600-00 | 417 | 0.9 | 4.9 | 9.9 | 4.3 | 3.6 | 25.3 | 51.7 | 1.2 | 2.0 | 2.2 | 0.2 | 0.4 | 1.5 | 1.6 | |
Os03t0111400-01 | 546 | 0.5 | 1.1 | 1.5 | 58.8 | 30.7 | 63.3 | 88.8 | 0.7 | 3.1 | 6.4 | 12.9 | 9.1 | 41.8 | 87.6 | |
MatE | Os03t0188100-01 | 1873 | 7.2 | 46.4 | 36.5 | 1.4 | 16.1 | 109.4 | 86.0 | 1.0 | 0.9 | 2.6 | 9.7 | 9.9 | 8.9 | 27.0 |
Os10t0344000-01 | 1782 | 10.3 | 22.1 | 14.9 | 1.8 | 27.7 | 60.6 | 40.5 | 0.8 | 4.0 | 15.5 | 2.9 | 2.0 | 14.3 | 58.7 | |
Os10t0345100-01 | 1902 | 5.1 | 9.9 | 7.5 | 10.9 | 59.4 | 117.1 | 88.4 | 0.8 | 3.3 | 4.0 | 12.5 | 9.9 | 42.8 | 53.0 | |
Os10t0344500-00 | 1560 | 3.0 | 9.3 | 7.1 | 0.4 | 3.1 | 11.8 | 8.8 | 0.8 | 1.0 | 1.9 | 11.3 | 8.5 | 11.2 | 22.4 | |
Zip | Os03t0411800-01 | 1332 | 0.4 | 0.7 | 2.0 | 7.3 | 2.1 | 4.9 | 16.0 | 1.5 | 3.5 | 13.6 | 9.8 | 15.0 | 36.6 | 146.0 |
PDR_assoc | Os01t0609300-02 | 1547 | 13.0 | 10.4 | 7.1 | 6.5 | 95.6 | 76.6 | 52.0 | 0.7 | 5.5 | 9.5 | 23.6 | 15.7 | 135.7 | 233.7 |
Os01t0609900-01 | 4826 | 2.3 | 1.0 | 1.1 | 68.1 | 157.0 | 71.1 | 74.2 | 1.0 | 3.1 | 5.3 | 25.8 | 24.9 | 81.2 | 140.8 | |
Os01t0609900-02 | 4445 | 2.2 | 0.9 | 1.0 | 73.7 | 166.8 | 68.4 | 71.5 | 1.0 | 3.1 | 5.3 | 27.9 | 26.9 | 88.6 | 152.0 | |