Fig. 3From: Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor Differential expression of L. bicolor TFs during the development of Douglas fir (P. menziesii) ECM. Clustering of 79 differentially-expressed L. bicolor TF transcripts (>2.5-fold; BH, modified t-test <0.05) during ECM development (2, 4 and 6Â weeks after contact) compared to free-living mycelium (see Additional file 4: Table S4 for the list of transcripts). Log2 transformed data were manually clustered. Each gene is represented by a row of coloured boxes (corresponding to ratio values) and a single column represents each time-point. Regulation levels range from pale to saturated colours (red for induction; blue for repression). White indicates no change in gene expression. Protein IDs are given for each cluster. TFs up- or downregulated during both poplar and Douglas fir ECM development are shown in red and blue, respectively. TFs regulated in an opposite manner in ECM root tips of P. trichocarpa or P. menziesii are in greenBack to article page