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Table 2 The variability of the individual loci used for the GCPSR based on the 10 loci data set. The loci are ordered based on the number of variable sites

From: Mitochondrial genomes reveal recombination in the presumed asexual Fusarium oxysporum species complex

Locus

Length

Conserved

PIa

The three clades

  

Interb

Intrac

Interb

Intrac

were monophyletic

rpl10a

795

762

783

28

7

no

cal

979

920

963

52

8

no

act

1634

1572

1605

54

21

no

tub2

1671

1586

1634

78

27

no

tef1a

1776

1650

1711

99

43

yes

tef3

3588

3456

3532

111

43

yes

top1

3170

2981

3114

177

45

yes

rpb2

3907

3653

3812

213

61

yes

rDNA

7990

7437

7689

483

223

no

mt

40841

39121

40153

1501

464

yes

  1. aParsimony informative sites
  2. bOutgroup + FOSC (clades 1, 2, 3)
  3. cFOSC (clades 1, 2, 3)