Table 1 Changes in statistics during scaffold assembly
Library used for assembly | Sequence number | Assembly length (Mb) | N50 (kb) | Unknown (Ns) (Mb) | |
|---|---|---|---|---|---|
Contigs | – | 25,527 | 290,5 | 19,8 | – |
Scaffolds | 3-5 kb | 4383 | 303,9 | 189,1 | 13,4 |
Scaffolds | 5-8 kb | 1906 | 312,3 | 439,4 | 21,8 |
Scaffolds | 8-11 kb | 1271 | 315,9 | 709,4 | 25,4 |
Scaffolds | 11-15 kb | 980 | 318,2 | 906,5 | 27,7 |
Scaffolds | BAC ends | 554 | 325,2 | 5324,1 | 34,6 |
Scaffolds | GapClosure | 554 | 324,7 | 6465,7 | 18,5 |