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Table 1 Changes in statistics during scaffold assembly

From: The cacao Criollo genome v2.0: an improved version of the genome for genetic and functional genomic studies

  Library used for assembly Sequence number Assembly length (Mb) N50 (kb) Unknown (Ns) (Mb)
Contigs 25,527 290,5 19,8
Scaffolds 3-5 kb 4383 303,9 189,1 13,4
Scaffolds 5-8 kb 1906 312,3 439,4 21,8
Scaffolds 8-11 kb 1271 315,9 709,4 25,4
Scaffolds 11-15 kb 980 318,2 906,5 27,7
Scaffolds BAC ends 554 325,2 5324,1 34,6
Scaffolds GapClosure 554 324,7 6465,7 18,5
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