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Table 2 Transcription factor families significantly enriched in down-regulated genes following 24 h of deacclimation (DEA) and in non-acclimated (NA) relative to cold acclimated plants

From: Rapid transcriptional and metabolic regulation of the deacclimation process in cold acclimated Arabidopsis thaliana

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Transcription factor family

24 h DEA

NA

27.3.11

C2H2 zinc finger family

X

X

27.3.7

C2C2(Zn) CO-like, Constans-like zinc finger family

X

X

27.3.26

MYB-related transcription factor family

X

X

27.3.3

AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family

X

X

27.3.8

C2C2(Zn) DOF zinc finger family

X

 

27.3.32

WRKY domain transcription factor family

X

X

27.3.35

bZIP transcription factor family

X

 

27.3.25

MYB domain transcription factor family

X

X

27.3.22

HB,Homeobox transcription factor family

X

 

27.3.62

Nucleosome/chromatin assembly factor group

X

X

27.3.16

CCAAT box binding factor family, HAP5

X

X

27.3.20

G2-like transcription factor family, GARP

X

X

27.3.9

C2C2(Zn) GATA transcription factor family

X

X

27.3.15

CCAAT box binding factor family, HAP3

X

X

27.3.18

E2F/DP transcription factor family

X

 

27.3.12

C3H zinc finger family

 

X

27.3.13

CCAAT box binding factor family, DR1

X

 

27.3.2

Alfin-like

X

X

27.3.30

Trihelix, Triple-Helix transcription factor family

X

X

27.3.4

ARF, Auxin Response Factor family

X

X

27.3.49

GeBP like

X

X

27.3.57

JUMONJI family

X

 

27.3.6

bHLH,Basic Helix-Loop-Helix family

X

X

27.3.63

PHD finger transcription factor

X

X

27.3.24

MADS box transcription factor family

 

X

33.3

development.squamosa promoter binding like (SPL)

X

 
  1. Fields with an X indicate significant enrichment of specific families