Table 3 Example of binary sequences using VLBE 3, for three genomes: G 1: (-2, -1, -3), G 2: (-1, 4, 2), and G 3: (-2, -1, -4, 1, 2)
From: Phylogeny analysis from gene-order data with massive duplications
| Â | Adjacencies | Content | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Encoding | (-3,-2) | (-2,-1) | (-1,-3) | (2,-1) | (-1,4) | (4,2) | (2,-2) | (-1,-4) | 1 | 2 | 3 | 4 |
G 1 | 1 | 01 | 1 | 0 | 0 | 0 | 0 | 0 | 01 | 01 | 1 | 0 |
G 2 | 0 | 00 | 0 | 1 | 1 | 1 | 0 | 0 | 01 | 01 | 0 | 1 |
G 3 | 0 | 11 | 0 | 0 | 1 | 0 | 1 | 1 | 11 | 11 | 0 | 1 |