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Table 4 The pathways and related differentially abundant proteins and metabolites for breast muscle in Beijing-You chickensa

From: Uncovering the embryonic development-related proteome and metabolome signatures in breast muscle and intramuscular fat of fast-and slow-growing chickens

PATHWAY

ED 12 - ED 17

ED 17 - D 1

D 1 - D 14

FXR/RXR Activation, LXR/RXR Activation

SERPINA1, COL3A1, RBP4, androsterone

APOB, C3, APOA1, VTN, GC

KNG1, C3, APOA1, TF, VTN, AHSG, GC, androsterone

Calcium Signaling

MYH2, TNNI2, TPM1, MYH7B, MYL1, CASQ2

MYH10, MYH2, MYH9, TNNC2, TNNT3, ATP2A2

MYH2, acetylcholine, TNNC1

Actin Cytoskeleton Signaling, Tight Junction Signaling

MYH2, MYL10, FLNA, ACTN2, MYH7B, MYL1

MYH10, MYH2, MYH9, ACTN2

KNG1, MYH2, acetylcholine, F2

Clathrin-mediated Endocytosis Signaling

HSPA8, SERPINA1, RBP4

SH3GL1, APOB, APOA1

APOA1, TF, F2

Unfolded protein response, Protein Ubiquitination Pathway

HSPA8, HSPA4, HSPA9, HSPA2, HSP90AA1, FKBP4

HSP90B1, HSPA5

P4HB, VCP

TCA Cycle II (Eukaryotic)

ACO2, succinic acid

SDHA, SUCLA2, L-malic acid, ACO2, IDH3A, MDH2, OGDH, succinic acid

L-malic acid, succinic acid

Protein Kinase A Signaling

GNB1, prostaglandin E2, MYH2, MYL10, TNNI2, FLNA, RACK1, MYL1

–

prostaglandin E2,MYH2, YWHAE, PDIA3, YWHAZ, PPP1R3A, PHKG1

Purine Nucleotides Degradation

inosine, hypoxanthine,

–

guanine, inosine, hypoxanthine, guanosine

Acute Phase Response Signaling

–

PLG, C3, APOA1

PLG, C3, APOA1, TF, AHSG, F2

Glycolysis I/ Gluconeogenesis I

–

PGK1, L-malic acid, MDH2

PGK1, GPI, L-malic acid, PGAM1, ENO2, GAPDH, BPGM, FBP2

PPARγ/RXR Activation

–

HSP90B1, ACADL, APOA1, PDIA3, GOT2

ACADL, APOA1, PDIA3

Superpathway of Methionine Degradation

–

BHMT, MAT1A, GOT1, GOT2

betaine, AHCY

Coagulation System

–

PLG, SERPINC1

KNG1, PLG, F2

Hypoxia Signaling in the Cardiovascular System

–

HSP90B1, LDHA

P4HB, LDHA

  1. a-means no differentially abundant proteins and metabolites enriched