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Table 2 Sequencing summary

From: De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii

Sample Name Sequencing Chemistry SMRTcells Movie Time (min) a Total Number of Subreads Total Number of Bases Mean Subread Length (bp) N50 Subread Length (bp) b
JS4 P4/C2 2 120 142,306 465,129,578 3268 4131
JS10 P4/C2 2 120 205,113 606,802,054 2958 3733
JS15 P4/C2 2 120 179,642 540,206,310 3007 3653
JS18 P4/C2 2 120 194,246 550,199,736 2832 3679
JS20 P4/C2 2 120 230,371 632,635,668 2746 3456
JS22 P4/C2 2 120 181,361 563,541,807 4090 3107
JS23 P4/C2 2 120 192,373 617,310,336 3208 4222
JS2 P5/C3 2 240 100,864 719,516,424 7133 8940
JS7 P5/C3 2 240 107,194 1,002,978,417 9356 13,043
JS8 P5/C3 2 240 139,418 1,149,552,255 8245 11,148
JS9 P5/C3 2 240 160,808 1,316,084,462 8184 11,023
JS11 P5/C3 2 240 184,744 1,422,323,823 7698 10,498
JS12 P5/C3 2 240 207,391 1,490,421,212 7186 9765
JS13 P5/C3 2 240 103,466 793,823,369 7672 10,156
JS14 P5/C3 2 240 125,130 966,521,587 7724 10,326
JS17 P5/C3 2 240 151,002 1,149,295,071 7611 10,232
JS21 P5/C3 2 240 173,843 1,298,367,718 7468 9906
JS25 P5/C3 2 240 192,104 1,293,994,542 6735 8805
  1. a run time during which nucleotides added by the polymerase are recorded in real-time
  2. b minimum length of subreads in which half of the sequencing data is found