Skip to main content


Fig. 4 | BMC Genomics

Fig. 4

From: Genomic preselection with genotyping-by-sequencing increases performance of commercial oil palm hybrid crosses

Fig. 4

Mean prediction accuracy over six replicates of hybrid crosses, when predicting cross values of Site 2 using a model calibrated on Site 1 for the PF trait, using GBLUP with random subsets of SNPs (solid black line), SNP subsets minimizing the percentage of missing data (red line) and control PBLUP (dashed line). The last level in the number of SNPs (6702) is the mean number of SNPs in Group A and Group B. Significance of ANOVA for method of SNP sampling: *** P < 0.001, * 0.01 ≤ P < 0.05, ns not significant. Values are means over n = 26 replicates of random marker subsets, n = 3 when minimizing percentage of missing data and n = 1 when using all the markers

Back to article page