Genomic regions associated with host response to porcine reproductive and respiratory syndrome vaccination and co-infection in nursery pigs

Table 5 QTL Test results for SNPs associated with vaccination VL

Trait	SNP List^a	# SNPs above threshold	# health QTL in region^b	Total # QTL in region^c	P-value
Vaccination VL	2	392	290	1092	6.5E-14
	2.5	124	37	367	0.99
	3	51	16	100	0.69

^aSNP List: Lists of SNPs from the GWAS with a –log₁₀ p-value above 2, 2.5 or 3
^bThe total number of health QTL in the genome (after filtering) is 1732
^cThe total number of QTL in the genome (i.e. across all QTL types and after filtering) is 9892

ISSN: 1471-2164