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Table 1 GGNGG enrichment at sites of SR45-dependent alternative splicing

From: Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana

   All ΔΨ > 0 ΔΨ < 0
Event Type Site GGNGG per kb. GGNGG per kb. Enrichment p-value GGNGG per kb. Enrichment p-value
A3 UI5 0.60 2.86 4.76 2.8E-20 1.70 2.84 3.0E-04
A3 UI3 0.96 2.91 3.02 1.3E-10 1.68 1.75 6.7E-02
A3 ASE 2.69 11.73 3.98 1.3E-16 6.48 2.32 2.7E-03
A5 ASE 2.49 15.33 6.49 1.4E-48 4.08 1.62 9.5E-02
A5 DI5 0.87 4.35 5.02 7.7E-26 2.87 3.32 1.2E-08
A5 DI3 0.99 2.52 2.55 2.3E-05 2.39 2.42 2.3E-04
RI UE 2.30 6.74 2.94 8.1E-29 3.98 1.73 2.3E-05
RI ASE 1.90 11.28 6.29 2.2E-62 2.43 1.85 7.3E-03
RI DE 3.70 10.58 2.86 1.3E-42 4.81 1.30 2.9E-02
  1. Enrichment statistics are shown only for GGNGG motif, and only for those sites that show significant enrichment (Additional file 11: Table S6) for either ΔΨ > 0, ΔΨ < 0, or both