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Table 2 Conserveda miRNA targets identified in Suaeda aralocaspica

From: Transcriptome assembly in Suaeda aralocaspica to reveal the distinct temporal gene/miRNA alterations between the dimorphic seeds during germination

miRNA family Target Annotation
miR156/157 Unigene25708 squamosa promoter-binding-like protein 6 isoform X2
Unigene30985 squamosa promoter-binding-like protein 2
miR159 Unigene5343 MYB protein, DUO POLLEN 1
miR160 Unigene37068 auxin response factor 10
Unigene36784 auxin response factor 16
Unigene39132 auxin response factor 17
miR162 Unigene29941 SUSPENSOR 1, Dicer-like 1
miR164 Unigene38871 NAC domain containing protein 100
miR165/166 Unigene32963 member of HD-ZIP III family, INCURVATA 4
Unigene47107 member of HD-ZIP III family, REVOLUTA
miR169 Unigene44960 CCAAT binding factor-HAP2-like protein, nuclear factor Y subunit A1
Unigene26545 CCAAT binding factor-HAP2-like protein, nuclear factor Y subunit A9
Unigene25577 nuclear factor Y subunit A-3
miR170/171 Unigene34442 HAIRY MERISTEM 3, SCL6-IV
Unigene44608 HAIRY MERISTEM 4, SCL15
miR172 Unigene26235 TARGET OF EARLY ACTIVATION TAGGED 1
Unigene13804 AP2-like ethylene-responsive transcription factor TOE3
miR319 Unigene42701 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2
Unigene46584 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3
miR393 Unigene37071 F-box protein, TRANSPORT INHIBITOR RESPONSE 1
Unigene37070 F-box protein, TRANSPORT INHIBITOR RESPONSE 1
Unigene47621 Auxin signaling F-box 3
miR394 Unigene26101 a putative F-box protein, LEAF CURLING RESPONSIVENESS
miR396 Unigene44576 growth-regulating factor 2
Unigene20645 growth-regulating factor 3
Unigene24713 growth-regulating factor 4
Unigene44047 growth-regulating factor 5
Unigene20255 growth-regulating factor 7
miR398 Unigene2632 copper/zinc superoxide dismutase 1
miR399 Unigene40813 a ubiquitin-conjugating E2 enzyme, UBIQUITIN-CONJUGATING ENZYME 24
miR408 Unigene47976 plantacyanin
Unigene39882 laccase 3
miR482 Unigene39969 disease resistance protein, CC-NBS-LRR class
  1. aConserved with Arabidopsis thaliana, Oryza sativa, or Solanum lycopersicum