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Table 1 Reads and Mapping Summary of BS-Seq and MeDIP-Seq Data

From: Analyses of methylomes of upland and lowland switchgrass (Panicum virgatum) ecotypes using MeDIP-seq and BS-seq

Sample

Total reads

Mapping rate

VS16 BS-Seq

346,153,526 pairs

41%

AP13 BS-Seq

361,531,121 pairs

45%

VS16 MeDIP Input

32,697,930

75%

VS16 MeDIP_1

52,396,117

72%

VS16 MeDIP_2

72,502,774

63%

VS16 MeDIP_3

62,601,002

63%

AP13 MeDIP Input

51,348,721

71%

AP13 MeDIP_1

69,288,317

66%

AP13 MeDIP_2

64,084,865

74%

AP13 MeDIP_3

57,373,811

79%

VS16 MeDIP Combined

187,499,893

66%

AP13 MeDIP Combined

190,746,993

73%