Skip to main content

Table 1 Reads and Mapping Summary of BS-Seq and MeDIP-Seq Data

From: Analyses of methylomes of upland and lowland switchgrass (Panicum virgatum) ecotypes using MeDIP-seq and BS-seq

Sample Total reads Mapping rate
VS16 BS-Seq 346,153,526 pairs 41%
AP13 BS-Seq 361,531,121 pairs 45%
VS16 MeDIP Input 32,697,930 75%
VS16 MeDIP_1 52,396,117 72%
VS16 MeDIP_2 72,502,774 63%
VS16 MeDIP_3 62,601,002 63%
AP13 MeDIP Input 51,348,721 71%
AP13 MeDIP_1 69,288,317 66%
AP13 MeDIP_2 64,084,865 74%
AP13 MeDIP_3 57,373,811 79%
VS16 MeDIP Combined 187,499,893 66%
AP13 MeDIP Combined 190,746,993 73%