Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales

Castanera, Raúl; Pérez, Gúmer; López-Varas, Leticia; Amselem, Joëlle; LaButti, Kurt; Singan, Vasanth; Lipzen, Anna; Haridas, Sajeet; Barry, Kerrie; Grigoriev, Igor V.; Pisabarro, Antonio G.; Ramírez, Lucía

doi:10.1186/s12864-017-4243-z

BMC Genomics

Table 2 GO terms significantly enriched in the predicted secretome of C. olivacea

From: Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales

Molecular Function	Description	GO/Secretome	GO/Genome	p value^a
GO:0030600	Feruloyl esterase activity	6/470	9/14,928	0.000171
GO:0042500	Aspartic endopeptidase activity, intra membrane cleaving	11/470	20/14,928	0.000192
GO:0008843	Endochitinase activity	8/470	14/14,928	0.000194
GO:0004568	Chitinase activity	8/470	14/14,928	0.000194
GO:0004650	Polygalacturonase activity	11/470	15/14,928	0.000354
GO:0004806	Triglyceridelipase activity	11/470	29/14,928	0.000376
GO:0016160	Amylase activity	25/470	40/14,928	0.000737
GO:0008933	Lytic transglycosylase activity	25/470	40/14,928	0.000737
GO:0015927	Trehalase activity	25/470	40/14,928	0.000737
GO:0015925	Galactosidase activity	25/470	40/14,928	0.000737
GO:0015924	Mannosyl-oligosaccharide mannosidase activity	25/470	40/14,928	0.000737
GO:0015929	Hexosaminidase activity	25/470	40/14,928	0.000737
GO:0015928	Fucosidase activity	25/470	40/14,928	0.000737
GO:0008810	Cellulase activity	9/470	11/14,928	0.00089
GO:0015926	Glucosidase activity	25/470	41/14,928	0.000948
GO:0015923	Mannosidase activity	25/470	41/14,928	0.000948
GO:0004620	Phospholipase activity	9/470	32/14,928	0.000968
GO:0004553	Hydrolase activity hydrolyzing O-glycosyl compounds	44/470	99/14,928	0.00105
GO:0004194	Obsolete pepsin A activity	17/470	42/14,928	0.00121
GO:0005199	Structural constituent of cell wall	16/470	33/14,928	0.00129
GO:0030246	Carbohydrate binding	9/470	25/14,928	0.00143
GO:0004190	Aspartic-type endopeptidaseactivity	20/470	44/14,928	0.00193
GO:0004099	Chitin deacetylase activity	5/470	9/14,928	0.00803
GO:0004185	Serine-type carboxypeptidase activity	5/470	12/14,928	0.0467
Biological Process
GO:0000272	Polysaccharide catabolic process	5/470	6/14,928	0.000414
GO:0006508	Proteolysis	43/470	189/14,928	0.00128
GO:0005975	Carbohydrate metabolic process	65/470	161/14,928	0.00176
GO:0006629	Lipid metabolic process	10/470	50/14,928	0.00674
Cellular Component
GO:0005576	Extracellular region	7/470	15/14,928	0.000354
GO:0005618	Cell wall	18/470	35/14,928	0.00224

^a Bonferroni corrected, Fisher p-value

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ISSN: 1471-2164

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