Table 4 Putative microRNA targets predicted in 26 BoCNGC transcripts
miRNA Acc. | Target Acc. | Expectation | Target Accessibility | Alignment | Inhibition | Multiplicity |
|---|---|---|---|---|---|---|
bol-miR5021a/j | BoCNGC4 | 2.5 | 16.412 | miRNA 20 AGAAGAAGAAGAAGAAGAAU 1 .::::::::::::::::: Target 60 CUUUCCUCUUCUUCUUCUUA 79 | Cleavage | 1 |
bol-miR838d | BoCNGC5 | 2.5 | 15.037 | miRNA 20 CUUGUUCUUCUUCUUCUUCU 1 :::: .::::::::.::.:: Target 2884 GAAGAGGAAGAAGAGGAGGA 2903 | Cleavage | 1 |
bol-miR838d | BoCNGC6 | 2.0 | 15.121 | miRNA 20 CUUGUUCUUCUUCUUCUUCU 1 :::::::.::.:::::::: Target 2593 GAAGAAGAGGAGGAAGAAGA 2612 | Cleavage | 1 |
bol-miR414b | BoCNGC8 | 3.0 | 16.071 | miRNA 21 ACUUCUACUUCUACUUCUACU 1 :::::::::.::::::::: Target 2589 UGAAGAUGAGUAUGAUGAUGA 2609 | Translation | 1 |
bol-miR838d | BoCNGC10 | 2.0 | 8.16 | miRNA 22 CACUUGUUCUUCUUCUUCUUCU 1 :::::::::::::::::::: Target 3520 GUGAUGAAGAAGAAGAAGAAGA 3541 | Cleavage | 1 |
bol-miR4234 | BoCNGC12 | 3.0 | 15.182 | miRNA 22 UGACGGUUGAUCAAAAUUCAAC 1 :.:.:::.:.:::::.::::: Target 2630 AUUUUCAAUUGGUUUUGAGUUG 2651 | Cleavage | 1 |
bol-miR838d | BoCNGC15 | 1.5 | 6.045 | miRNA 20 CUUGUUCUUCUUCUUCUUCU 1 :::::::.::::::::::: Target 103 GAAGAAGAGGAAGAAGAAGA 122 | Cleavage | 2 |
bol-miR838d | BoCNGC15 | 2.5 | 8.952 | miRNA 21 ACUUGUUCUUCUUCUUCUUCU 1 :::.::::::::::::::: Target 135 UGAGAAAGAUGAAGAAGAAGA 155 | Cleavage | 2 |
bol-miR838d | BoCNGC16 | 3.0 | 6.192 | miRNA 20 CUUGUUCUUCUUCUUCUUCU 1 :::: .::.:::::::::: Target 94 GAAGAGGAGGACGAAGAAGA 113 | Translation | 2 |
bol-miR838d | BoCNGC16 | 1.5 | 2.883 | miRNA 20 CUUGUUCUUCUUCUUCUUCU 1 ::::::::.:::::.::.:: Target 124 GAACAAGAGGAAGAGGAGGA 143 | Cleavage | 2 |
bol-miR_new2 | BoCNGC26 | 3.0 | 11.462 | miRNA 20 UGGGAUUUAGUAUUUAGGAU 1 :::..::::::::::::: Target 639 ACCUGGAAUCAUAAAUCCUC 658 | Cleavage | 1 |