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Table 4 Custom CDF naming examples

From: Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest

CDF Type

Probe Set Name

Region-based

ENSG00000001036_exon_-

ENSG00000001084_UTR_-

ENSG00000001167_CDS_+

Gene-based

ENSG00000001461

Transcript-based

ENST00000489806

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BMC Genomics

ISSN: 1471-2164

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