Fig. 3
From: A systematic survey to identify lethal recessive variation in highly managed pig populations
Runs of homozygosity (ROH) and extended haplotype homozygosity (EHH) on SSC18. a Individual Large White pigs are represented as horizontal lines, with blue bars indicating a homozygous segment at that position on SSC18. The red bars on top indicate all significant haplotypes in the Large White, with the haplotype LW19 (SSC18:43-44Â Mb) indicated in black. Clustered homozygous segments are an indication of a haplotype putative under selection. b Local breakdown of LD in the Large White population at the LW19 haplotype locus. The bifurcation diagram displays haplotypes starting at the BMPER locus and extending either up- or downstream of the BMPER gene. Line thickness represents proportion of haplotypes. Red and yellow bars indicate locations of genes as annotated in Ensembl (release 87)