From: A systematic survey to identify lethal recessive variation in highly managed pig populations
Description | Synthetic boar line | Landrace | Large white |
---|---|---|---|
Number of samples | 5488 | 5056 | 12,417 |
Number of trios | 3806 | 2548 | 8778 |
Number of haplotypes | 41 | 16 | 88 |
Number of loci | 32 | 16 | 70 |
Haplotype length (markers) | 25.4 (18.5) | 19.3 (22.3) | 36.04 (37.0) |
Haplotypes in window (frequency > 0.5%) | 16.3 (7.8) | 22.2 (10.3) | 25.1 (13.3) |
Number of carriers | 707.5 (348.9) | 689.9 (290.8) | 972.1 (545.3) |
Haplotype frequency | 6.4 (3.2) | 6.8 (2.9) | 3.9 (2.2) |
Homozygous expected | 24.3 (27.6) | 18.4 (10.5) | 22.2 (22.6) |
Carrier matings with genotyped offspring | 29.9 (31.6) | 36.1 (20.6) | 33.6 (34.6) |
Carrier matings in pedigree | 72.9 (69.5) | 169.8 (119.0) | 104.7 (107.8) |
Genotyped carrier progeny | 96.8 (109.7) | 73.75 (42.1) | 88.8 (90.2) |
% Heterozygous carrier progeny | 55.1 | 60.3 | 53.8 |
Genes in window | 21.2 (26.3) | 15.8 (22.0) | 19.0 (19.7) |