Fig. 7

Mitochondrial DNAs insertions into four Gossypium nuclear genomes detected by whole-genome alignment. The results were filtered to select only those alignments which comprise the one-to-one mapping between reference and query, and then display a dotplot of the selected alignments. The red and blue lines refer positive and reverse matches, respectively. a: Dot matrix analysis of numts in Gossypium raimondii (D₅) nuclear genome performed using MUMmer (Delcher et al., 2002). b: Dot matrix analysis of numts in G. arboreum (A₂) nuclear genome. c: Dot matrix analysis of numts in G. hirsutum (AD₁) nuclear genome. d: Dot matrix analysis of numts in G. barbadense (AD₂) nuclear genome