Fig. 8
From: Phylogenetic and recombination analysis of the herpesvirus genus varicellovirus
Phylogenetic, genetic distance, and recombination analysis of FHV-1. a Maximum likelihood tree of FHV-1 genomic sequences generated using RAxML, with CHV-1 as an outgroup. Bootstrap values over 65% are shown. Phylogenetic network (b) was produced using Splitstree (kimura 2-parameter, gamma = 1.37213, and no p-inverse value). The overall genetic distance (Mega 6, pairwise deletion) was 0.0089%. Recombination bootscan analysis (RDP4) of strain 221/71 scanned against the remaining FHV-1 strains is shown in panel c. Viral strains in panels a and b are colored according to country of origin (green: Australia, and blue: USA)