Characteristic | Sg | Plh | Hpa | Phi | Phs |
---|---|---|---|---|---|
Estimated genome size | 360 Mbp | 100 Mbp | 100 Mbp | 240 Mbp | 95 Mbp |
Number of scaffolds | 64,505 | 3162 | 3408 | 4921 | 1810 |
N50 scaffold length | 24.3 kbp | 1540 kbp | 332 kbp | 1570 kbp | 463 kbp |
Total scaffold length | 254 Mbp | 75 Mbp | 78.4 Mbp | 228.5 Mbp | 86.0 Mbp |
GC content | 46.4% | 45.3% | 47% | 51.0% | 54.4% |
Repeat (%) | 73% | 40% | 42% | 74% | 39% |
Number of genes | 16,736 | 15,469 | 14,321 | 17,787 | 18,969 |
 Secreted protein genes | 1220 | 631 | 762 | 1568 | 1701 |
CEGMA | |||||
 Group 1b | 92.42% | 93.94% | 89.5% | 96.97% | 96.97% |
 Group 2 b | 94.64% | 96.43% | 96.5% | 96.43% | 98.21% |
 Group 3 b | 98.36% | 98.36% | 98.5% | 96.72% | 100.00% |
 Group 4 b | 96.92% | 100.00% | 97.0% | 96.92% | 98.46% |