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Fig. 1 | BMC Genomics

Fig. 1

From: RNA-seq and Tn-seq reveal fitness determinants of vancomycin-resistant Enterococcus faecium during growth in human serum

Fig. 1

Maximum likelihood phylogenetic tree of E. faecium. The phylogenetic tree was based on a core genome alignment of 1,545,750 positions that was generated by ParSNP [61]. The tree includes the E. faecium E745 genome sequence generated in this study and the 72 E. faecium whole genome sequences described in Lebreton et al. [4]. The tree was visualized and mid-point rooted using MEGA 7.0.26 [62]. The different E. faecium clades are indicated. The position of E. faecium E745 in the phylogenetic tree is highlighted by an arrow

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