Table 3 Databases used for RNA Seq experiments
From: Association of variation in the sugarcane transcriptome with sugar content
Features | SoGI | SUGIT | SAS |
|---|---|---|---|
Total number of contigs | 121,342 | 107,598 | 43,141 |
Total number of bases | 88,397,709 | 166,929,028 | 35,730,322 |
Longest contig (bp) | 4854 | 18,858 | 6193 |
Shortest contig (bp) | 100 | 307 | 56 |
N50 (bp) | 729 | 1994 | 827 |
N75 (bp) | 642 | 1269 | 641 |