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Table 8 DGEs obtained between low sugar top (LST) and low sugar bottom (LSB) internode samples with three databases SoGI, SUGIT and SAS. Shown here are some of the sucrose/sugar related transcripts

From: Association of variation in the sugarcane transcriptome with sugar content

Feature ID Description Fold change (original values) FDR < 0.01
SoGI-DGE
 CA267680 Sugar-phosphate isomerase-like protein −24.39 2.84E-03
 TC123316 Sucrose synthase 2 −19.2 0.01
 TC150523 Glycosyltransferase sugar-binding region −11.03 0.01
 TC153302 ADP-sugar diphosphatase −8.41 7.81E-04
 CA240368 Sucrose non-fermenting related protein kinase −8.31 2.30E-03
 TC141576 Sucrose phosphate phosphatase −7.69 7.81E-04
 CA136361 UDP-sugar pyrophosphorylase −7.43 4.96E-03
 TC140141 Impaired sucrose induction 1-like protein −7.14 2.07E-03
 TC136732 Sucrose transporter SUT4 −7.08 1.02E-03
 TC113476 Sucrose phosphate synthase II −6.44 9.73E-04
 TC146044 Sugar transporter ERD6-like 5 −5.84 9.77E-04
 CA233504 Sugar phosphate exchanger 2 −5.74 5.88E-03
 TC117267 Sucrose phosphate synthase III −5.61 9.44E-04
 CA291037 Sucrose synthase 3 −5.4 1.86E-03
SUGIT-DGE
 c26397f1p01230 Sucrose synthase −12.81 0.01
 c96752f1p02674 sugar transporter type 2a −9.5 0.01
 c10824f1p0909 SUT2-h1 −7.52 0.01
 c29857f1p01086 UDP-sugar pyrophosphorylase −6.95 0.00131
 c65976f2p01948 SUT4-h1 −6.6 0.0081
 c1589f4p31134 Bidirectional sugar transporter SWEET −5.14 0.00455
 c42187f1p11882 Sucrose non-fermenting related kinase 1b −5.44 0.01
 c106308f1p04384 Sucrose phosphate synthase A −5.12 0.00358
SAS-DGE
 SCJLHR1025D07.g bidirectional sugar transporter SWEET3 −14.92 9.46E-03
 SCCCRZ1002G07.g sucrose-phosphate synthase 1 −13.59 9.84E-03
 SCEQRT2090C11.g Sucrose transport SUC3 −12.97 5.05E-04
 SCQGST3153F06.g sugar transport 5-like −9.65 1.12E-03
 SCCCLR2C03H09.g sugar transporter ERD6-like 6 −9.36 1.34E-03
 SCEZAM2031D12.g UDP-sugar pyrophosphorylase −9 3.23E-04
 SCAGLR1021A01.g sugar phosphate phosphate translocator −8.78 3.46E-04
 SCBGSD2049G08.g sugar transport 7 −6.25 6.77E-03
 SCCCRT2001F10.g sucrose non-fermenting 4 −6.15 3.42E-04
 SCEZRZ1013G04.g Galactinol-sucrose galactosyltransferase 2 −6.09 1.07E-03
 SCEPLR1008A12.g sucrose transport SUC4-like −5.94 2.87E-04
 SCCCRZ1004G04.g impaired sucrose induction 1 −5.76 5.49E-04
 SCEZLR1031D07.g sucrose-phosphatase 2 −5.59 2.62E-04
 SCSGHR1068D07.g UDP-sugar transporter −4.91 5.61E-04
 SCEPCL6023F02.g sucrose synthase 2 −4.89 9.76E-04
 SCEQAM1036A06.g sucrose-phosphate synthase 3 −4.41 0.01
  1. SoGI-Saccharum officinarum gene indices; SUGIT-Sugarcane Iso-Seq transcriptome database; SAS-sugarcane assembled sequences