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Table 8 DGEs obtained between low sugar top (LST) and low sugar bottom (LSB) internode samples with three databases SoGI, SUGIT and SAS. Shown here are some of the sucrose/sugar related transcripts

From: Association of variation in the sugarcane transcriptome with sugar content

Feature ID

Description

Fold change (original values)

FDR < 0.01

SoGI-DGE

 CA267680

Sugar-phosphate isomerase-like protein

−24.39

2.84E-03

 TC123316

Sucrose synthase 2

−19.2

0.01

 TC150523

Glycosyltransferase sugar-binding region

−11.03

0.01

 TC153302

ADP-sugar diphosphatase

−8.41

7.81E-04

 CA240368

Sucrose non-fermenting related protein kinase

−8.31

2.30E-03

 TC141576

Sucrose phosphate phosphatase

−7.69

7.81E-04

 CA136361

UDP-sugar pyrophosphorylase

−7.43

4.96E-03

 TC140141

Impaired sucrose induction 1-like protein

−7.14

2.07E-03

 TC136732

Sucrose transporter SUT4

−7.08

1.02E-03

 TC113476

Sucrose phosphate synthase II

−6.44

9.73E-04

 TC146044

Sugar transporter ERD6-like 5

−5.84

9.77E-04

 CA233504

Sugar phosphate exchanger 2

−5.74

5.88E-03

 TC117267

Sucrose phosphate synthase III

−5.61

9.44E-04

 CA291037

Sucrose synthase 3

−5.4

1.86E-03

SUGIT-DGE

 c26397f1p01230

Sucrose synthase

−12.81

0.01

 c96752f1p02674

sugar transporter type 2a

−9.5

0.01

 c10824f1p0909

SUT2-h1

−7.52

0.01

 c29857f1p01086

UDP-sugar pyrophosphorylase

−6.95

0.00131

 c65976f2p01948

SUT4-h1

−6.6

0.0081

 c1589f4p31134

Bidirectional sugar transporter SWEET

−5.14

0.00455

 c42187f1p11882

Sucrose non-fermenting related kinase 1b

−5.44

0.01

 c106308f1p04384

Sucrose phosphate synthase A

−5.12

0.00358

SAS-DGE

 SCJLHR1025D07.g

bidirectional sugar transporter SWEET3

−14.92

9.46E-03

 SCCCRZ1002G07.g

sucrose-phosphate synthase 1

−13.59

9.84E-03

 SCEQRT2090C11.g

Sucrose transport SUC3

−12.97

5.05E-04

 SCQGST3153F06.g

sugar transport 5-like

−9.65

1.12E-03

 SCCCLR2C03H09.g

sugar transporter ERD6-like 6

−9.36

1.34E-03

 SCEZAM2031D12.g

UDP-sugar pyrophosphorylase

−9

3.23E-04

 SCAGLR1021A01.g

sugar phosphate phosphate translocator

−8.78

3.46E-04

 SCBGSD2049G08.g

sugar transport 7

−6.25

6.77E-03

 SCCCRT2001F10.g

sucrose non-fermenting 4

−6.15

3.42E-04

 SCEZRZ1013G04.g

Galactinol-sucrose galactosyltransferase 2

−6.09

1.07E-03

 SCEPLR1008A12.g

sucrose transport SUC4-like

−5.94

2.87E-04

 SCCCRZ1004G04.g

impaired sucrose induction 1

−5.76

5.49E-04

 SCEZLR1031D07.g

sucrose-phosphatase 2

−5.59

2.62E-04

 SCSGHR1068D07.g

UDP-sugar transporter

−4.91

5.61E-04

 SCEPCL6023F02.g

sucrose synthase 2

−4.89

9.76E-04

 SCEQAM1036A06.g

sucrose-phosphate synthase 3

−4.41

0.01

  1. SoGI-Saccharum officinarum gene indices; SUGIT-Sugarcane Iso-Seq transcriptome database; SAS-sugarcane assembled sequences