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Fig. 8 | BMC Genomics

Fig. 8

From: A compendium of transcription factor and Transcriptionally active protein coding gene families in cowpea (Vigna unguiculata L.)

Fig. 8

Cowpea and common bean AUX_IAA sequences, with predictive heatmaps for cowpea TFs based on FPKM expression values from cowpea transcriptome data on VuGEA [43]. This tree was generated using RAxML [62] with 100 bootstrap values with the optimal amino acid substitution model automatically chosen in RAxML (i.e., the PROTGAMMAAUTO option). Sequences starting with “C3” or “scaffold” are cowpea sequences, while sequences starting with “Phvul” are from common bean. The circles on the branches are bootstrap support values from 50 to 100, with the largest circles representing the greatest bootstrap support

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