Table 1 Per-SNP likelihoods of autozygosity and non-autozygosity
From: Weighted likelihood inference of genomic autozygosity patterns in dense genotype data
G k | Pr(G k | X k  = 1) | Pr(G k | X k  = 0) |
|---|---|---|
AA | (1 − ε)f A,j  + εf A,j | \( {f}_{A,j}^2 \) |
AB | 2εf A,j f B,j | 2f A,j f B,j |
BB | (1 − ε)f B,j  + εf B,j | \( {f}_{B,j}^2 \) |
Missing | 1 | 1 |