Comparative analysis of avian poxvirus genomes, including a novel poxvirus from lesser flamingos (Phoenicopterus minor), highlights the lack of conservation of the central region

Carulei, Olivia; Douglass, Nicola; Williamson, Anna-Lise

doi:10.1186/s12864-017-4315-0

Table 3 47 ORFs found to be uniquely conserved in each of the fully sequenced avian poxvirus genomes

From: Comparative analysis of avian poxvirus genomes, including a novel poxvirus from lesser flamingos (Phoenicopterus minor), highlights the lack of conservation of the central region

FWPV	CNPV	PEPV	FeP2	FGPV	TKPV	SWPV1	SWPV2	Function
016	032	019	019	011	001.1a	024	028	Ig-like domain
017	033	020	020	012	002	025	029	V-type Ig domain
020	038	024	024	017	005	028	034	C4L/C10L protein
021	039	025	025	018	006	029	035	GPCR
022	040	026	026	019	007	030	036	Ankyrin repeat
023	041	027	027	020	008	031	037	Ankyrin repeat
024	042	028	028	021	009	032	038	Ankyrin repeat
030	048	035	035	029	012	038	044	Alkaline phosphodiesterase
031	050	036	036	030	013	040	046	Ankyrin repeat
035	053	040	038	034	016	044	049	Hypothetical protein
037	055	041	039	036	017	046	051	Hypothetical protein
039	058	043	041	038	020	049	054	B-cell lymphoma 2 (Bcl-2)
040	059	044	042	039	021	050	055	Serpin
043	061	046	044	041	022	052	057	DNA ligase
044	062	047	045	042	023	053	058	Serpin family
046	063	048	046	043	024	054	059	Hydroxysteroid dehydrogenase
047	065	049	047	044	025	056	061	Semaphorin
048	068	050	048	045	026	059	064	GNS1/SUR4
054	076	056	054	051	032	066	072	mutT motif
065	088	067	065	064	040	078	083	Hypothetical protein
068	092	070	068	067	042	082	087	Hypothetical protein
070	094	072	070	069	044	084	089	T10-like protein
071	097	075	072	072	046	087	092	Hypothetical protein
075	103	078	077	076	050	092	098	N1R/p28
086	113	089	087	087	060	102	108	Thymidine kinase
091	118	095	093	093	065	107	113	Hypothetical protein
092	119	096	094	094	066	108	114	Hypothetical virion core protein
104	131	108	106	106	075	120	126	Hypothetical protein
105	132	109	107	107	076	121	127	Hypothetical protein
110	137	114	112	112	080	126	132	Hypothetical protein
113	140	117	115	115	083	129	135	Hypothetical protein
145	191	153	146	151	109	167	179	Hypothetical protein
151	199	159	153	157	113	175	187	Deoxycytidine kinase
190	264	203	195	204	140	237	250	A-type inclusion protein
191	265	204	196	205	141	238	251	A-type inclusion protein
196	270	210	202	211	144	243	256	Hypothetical protein
201	273	215	207	216	149	247	259	Hypothetical protein
203	274	216	208	217	150	248	260	Tyrosine kinase
205	276	218	210	219	151	250	262	Hypothetical protein
207	278	220	212	221	151.1a	252	264	Hypothetical protein
208	281	222	214	224	152	255	267	Hypothetical protein
211	285	225	216	227	153	259	271	Epidermal Growth Factor
212	286	226	217	228	154	260	272	Serine/threonine protein kinase
213	287	227	218	229	155	261	273	Hypothetical protein
214	289	228	219	230	156	263	275	Putative 13.7 kDa protein
219	296	234	226	238	161	272	282	Ankyrin repeat
232	304	248	238	251	164	283	290	Ankyrin repeat

^atkpv 001.1 and 151.1 as well as ^aswpv1 241.1 and ^aswpv2 254.1 were not reported in the literature [11, 12], but were identified on inspection of the sequences deposited in Genbank

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ISSN: 1471-2164

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