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Fig. 4 | BMC Genomics

Fig. 4

From: Phased secondary small interfering RNAs in Panaxnotoginseng

Fig. 4

Identified targets of 21 nt phasiRNAs in P. notoginseng. The arrows in the upper panels correspond to the positions pointed by the arrows of the same colors in the lower panels. In Part (a) to (c), the numbers above the red arrows indicate the number of degradome reads from the position and the numbers in the parenthesis are the cleavage frequencies determined by the RLM 5’-RACE experiments. a TR99526 |c0_g8_i1, a putative PPR gene, targeted by P21_TR102758_c4_g2_i1_1_siR6. b TR103191 |c10_g7_i6, a putative PPR gene, P21_TR102892_c15_g4_i1_1_siR18. c TR102616 |c0_g2_i2, a putative PPR gene, P21_TR86043_c0_g1_i1_1_siR19. d TR102419 |c3_g16_i2, an unknown gene, targeted by P21_TR99791_c3_g7_i1_1_siR1. e TR8286 |c0_g1_i1, a putative ribosomal protein like gene, targeted by P21_TR103172_c2_g2_i6_1_siR4. f TR102500 |c1_g1_i1, a putative 60S ribosomal protein, targeted by P21_TR103172_c2_g2_i6_1_siR4. g TR83223 |c0_g1_i1, a putative heat shock protein like gene, targeted by P21_TR98899_c0_g1_i1_1_siR60. h TR82797 |c0_g1_i1, 60S putative ribosomal protein, targeted by P21_TR102165_c2_g3_i3_1_siR2. i TR102419 |c3_g16_i2, an unknown gene, targeted by P21_TR99791_c3_g7_i1_1_siR1

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