Table 10 Time cost portfolio for 5× WGS time cost on average and in total
From: GT-WGS: an efficient and economic tool for large-scale WGS analyses based on the AWS cloud service
Step | Time cost | Total time | Time per 5× WGS | |
|---|---|---|---|---|
1 | Mapping | 1.80 min | 1199.74mins | 2.39mins |
2 | BAM Merging and Sorting | 0.40 min | ||
3 | Variants calling | 5.06 min | ||
4 | VCF Merging | 33.6 s |