Table 4 Time cost for each step in 55× WGS
From: GT-WGS: an efficient and economic tool for large-scale WGS analyses based on the AWS cloud service
Step | Time cost | |
|---|---|---|
1 | Mapping | 4.7 min |
2 | BAM Merging and Sorting | 3.6 min |
3 | Variants calling | 8.9 min |
4 | VCF Merging | 23.2 s |