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Fig. 3 | BMC Genomics

Fig. 3

From: PGAP-X: extension on pan-genome analysis pipeline

Fig. 3

The whole genome alignment result among 14 Streptococcus pneumoniae strains. a Is the default status of the visualized alignment result, and (b) is the re-plotted and visualized alignment result after clicking the black triangle, and the whole genome was realigned based on the center of the clicked sites. Colored blocks are different homologous genomic fragment regions in each strain, and all DNA genomic fragments are marked with the same color with the corresponding homologous genomic fragment regions in other strains. Blocks below the center line indicate that regions are aligned in the reverse complement orientation (inversion)

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