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Table 2 Correlations between quantitative real-time PCR with microarray expression for selected genes (n=22)

From: Time course study of the response to LPS targeting the pig immune gene networks

Gene name Gene description List that provided the gene Pearson correlation p-value (Fluidigm) Gene expression profile
CHI3L1 chitinase 3 like 1 (List 1) 0.72 1.68e-07 down at t=+1
      up at t=+24
CHIT1 chitinase 1 (List 1) 0.68 0.00214 down at t=+1
      up at t=+24
CLEC2D C-type lectin domain family 2 member D (List 2), (List 3) 0.60 0.0019 down at t=+1
      up at t=+24
GALK2 galactokinase 2 (List 1) 0.50 9.52e-11 down at t=+1
      up at t=+24
HSD17B11 hydroxysteroid (17-beta) (List 1) 0.67 3.02e-11 down at t=+1
  dehydrogenase 11     up at t=+24
KAT5 lysine acetyltransferase 5 (List 1) 0.53 5.37e-09 down at t=+1
      up at t=+24
LCK LCK proto-oncogene, Src family (List 1) 0.74 3.77e-10 down at t=+1
  tyrosine kinase     up at t=+24
MSN moesin (List 1) 0.61 5.68e-05 down at t=+1
      up at t=+24
MYLIP myosin regulatory light chain (List 1) 0.72 2.26e-10 down at t=+1
  interacting protein     up at t=+24
RAB31 RAB31, member RAS oncogene family (List 1) 0.65 0.00152 down at t=+1
      up at t=+24
RARA retinoic acid receptor alpha (List 1) 0.58 6.59e-05 down at t=+1
      up at t=+24
SSH1 slingshot protein phosphatase 1 (List 1), (List 2) 0.67 1.28e-11 down at t=+1
   (List 3)    up at t=+24
VAT1 vesicle amine transport 1 (List 1) 0.75 1.26e-12 down at t=+1
      up at t=+24
VNN2 vanin 2 (List 1) 0.52 0.74 down at t=+1
      up at t=+24
CERS4 ceramide synthase 4 (List 2), (List 3) 0.60 1.16e-06 down at t=+1
      up at t=+4
FAS Fas cell surface death receptor (List 1), (List 2) 0.83 <2e-16 down at t=+1
   (List 3)    up at t=+4
JAK2 Janus kinase 2 (List 2), (List 3) 0.52 2.54e-10 down at t=+1
      up at t=+4
ADAM10 ADAM metallopeptidase domain 10 (List 1) 0.56 8.15e-05 down at t=+4
      up at t=+24
ANXA7 annexin A7 (List 1) 0.59 0.000417 down at t=+4
      up at t=+24
COMT catechol-O-methyltransferase (List 1) 0.75 1.64e-14 down at t=+4
      up at t=+24
STMN1 stathmin 1 (List 1) 0.69 3.24e-09 down at t=+4
      up at t=+24
SOD2 superoxide dismutase 2, (List 1) 0.74 <2e-16 up at t=+4
  mitochondrial     down at t=+24
  1. p-value (Fluidigm) gives the time effect of quantitative real-time PCR data for every gene