Skip to main content

Table 1 Hot Spot of Differentially Expressed Genes

From: Pronounced strain-specific chemosensory receptor gene expression in the mouse vomeronasal organ

Chr Start End Span (MB) Expr. Genes DE genes % DE Prominent Gene Families
6 48,448,229 48,754,210 0.31 25 11 44% GIMAP
6 56,172,928 57,664,632 1.49 39 14 35.9% Vmn1r (Clade C)
6 89,316,314 90,600,203 1.28 46 19 41.3% Vmn1r (Clades A, B)
6 123,195,632 124,082,601 0.89 27 11 40.7% Clec, Vmn2r (Clade B)
6 128,648,576 129,740,484 1.09 62 28 45.2% Clec, Klr
6 136,506,167 138,079,916 1.57 30 12 40% NA
7 7,171,330 9,389,264 2.22 67 32 47.8% Vmn2r (Clade A4)
7 23,272,801 24,143,241 0.87 41 18 43.9 Vmn1r (Clade D)
7 104,140,623 104,601,779 0.46 32 13 40.6 Olfr, Trim
16 44,347,121 47,758,671 3.41 40 17 42.5 Cd200, Cd200r
17 17,830,352 20,405,756 2.58 44 19 43.2 Fpr, Vmn2r (Clade A8)
17 34,031,812 36,198,513 2.17 122 47 38.5 Btnl, MHC (Clades IIa, IIb, Ia, Ib)
Hot Spot Totals 18.34 575 241 41.9%  
Whole Genome   44,957 5745 12.8%