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Table 1 Fold changes of DEGs identified by RNA-seq in blood orange during fruit development and ripening

From: Comparative transcriptome and proteome profiling of two Citrus sinensis cultivars during fruit development and ripening

Gene ID

Annotation

FDR

log2 FC

DAF

Changes at transcription level by qPCR

Cs5g09220

Acid invertase

3.29E-04

−1.935

238

down**

Cs6g15900

Glutathione S-transferase

1.71E-67

6.313

238

up**

Cs9g11190

Chalcone synthase

2.71E-136

7.62

238

up**

Cs3g25090

Dihydroflavonol 4-reductase

1.93E-59

8.18

238

up**

Cs6g17570

R2R3 MYB transcription factor

2.83E-05

4.115

238

up**

Cs5g31400

bHLH type transcription factor

0.000077719

0.995

238

up**

Cs9g04810

WD repeat transcription factor

0.000365

0.849

238

up**

Cs6g01290

ATP-citrate synthase

0.00000291

0.786

238

up**

Cs5g09220

Acid invertase

either > 0.05

or < 0.75

302

down

Cs6g15900

Glutathione S-transferase

0.0034835278

2.498

302

up*

Cs9g11190

Chalcone synthase

0.0015239598

1.87

302

up*

Cs3g25090

Dihydroflavonol 4-reductase

3.26E-04

2.304

302

up*

Cs6g17570

R2R3 MYB transcription factor

either > 0.05

or < 0.75

302

up**

Cs5g31400

bHLH type transcription factor

either > 0.05

or < 0.75

302

up

Cs9g04810

WD repeat transcription factor

either > 0.05

or < 0.75

302

up

Cs6g01290

ATP-citrate synthase

either > 0.05

or < 0.75

302

up*

  1. Asterisks represents statistically significant differences (* P < 0.05; ** P < 0.01)