Skip to main content

Table 3 Sensitivity and specificity of the FosBin tool with real coverage and simulated coverage levels

From: A-GAME: improving the assembly of pooled functional metagenomics sequence data

   Real coverage Simulated coverage
N° of fosmidsa N° of fragmentsb Sensitivity Specificity Sensitivity Specificity
8 2 0.748 0.874 0.808 0.904
8 3 0.766 0.922 0.822 0.941
8 5 0.713 0.943 0.779 0.956
12 2 0.717 0.858 0.782 0.891
12 3 0.726 0.909 0.790 0.930
12 5 0.701 0.940 0.769 0.954
18 2 0.656 0.828 0.730 0.865
18 3 0.635 0.878 0.711 0.904
18 5 0.589 0.918 0.670 0.934
  1. aNumber of inserts included in the simulated pool
  2. bNumber of distinct fragments generated from each insert