Table 1 The characteristics of NPC genes from G. hirsutum
Gene name | Locus | Strand | ORF length (bp) | Protein | Intron number | ||
|---|---|---|---|---|---|---|---|
Length (aa) | Mw (kDa) | pI | |||||
GhNPC1a | scaffold269.1:65,602-67,720 | – | 1461 | 486 | 54.52 | 6.37 | 2 |
GhNPC1b | D03: 22,587,094-22,589,215 | – | 1461 | 486 | 54.51 | 6.37 | 2 |
GhNPC2a | D07:17,824,914-17,829,009 | + | 1563 | 520 | 58.71 | 6.44 | 3 |
GhNPC2b | A07:22,144,436-22,148,517 | + | 1548 | 515 | 58.13 | 6.45 | 3 |
GhNPC3a | scaffold3511_A13:74,984-69,115 | – | 1527 | 508 | 56.96 | 5.18 | 3 |
GhNPC3b | A08: 33,048,822-33,049,930 | – | 918 | 305 | 34.64 | 5.76 | 2 |
GhNPC4 | D11:43,575,117-43,570,466 | – | 1683 | 560 | 63.80 | 6.38 | 2 |
GhNPC6a | A07: 4,310,983-4,312,741 | + | 1569 | 522 | 58.04 | 6.68 | 2 |
GhNPC6b | D07: 6,984,026-6,985,784 | + | 1569 | 522 | 58.17 | 6.84 | 2 |
GhNPC6c | A07:5,762,622-5,765,615 | + | 1530 | 509 | 56.64 | 6.74 | 2 |
GhNPC6d | D07:5,782,790-5,785,614 | + | 1530 | 509 | 56.80 | 6.74 | 2 |