Fig. 4
From: Transcriptome analysis reveals key roles of AtLBR-2 in LPS-induced defense responses in plants
Comparison of RNA-Seq results with those of qRT-PCR. The Log2FC values for transcript levels observed in RNA-Seq data (white bar) of randomly selected 20 genes, including AtLBR-2-dependent -independent up- or down-regulated genes, were compared to the results obtained from qRT-PCR (gray bar). AtLBR-2-dependent up- or down-regulated genes are indicated with asterisk: CYP71A13, LURP1, PNP-A, AIG1, GSTF7, PDR12, UNE11, and AT3G20340. AtLBR-2-independent up- or down-regulated genes are indicated without asterisk: HVA22B (AT5G62490), HVA22 homologue B; PDF1.3 (AT2G26010), plant defensin 1.3; CLE21 (AT5G64800), clavata3/ESR-related 21; HAI2 (AT1G07430), highly ABA-induced 2; LEA4–5 (AT5G06760), late embryogenesis abundant 4–5; HR2 (AT3G50460), homolog of RPW8 2; ATH2 (AT3G47740), A. thaliana ABC2 homolog 2; MES13 (AT1G26360), methyl esterase 13; M17 (AT2G41260), late embryogenesis abundant gene; PR12 (AT1G75830); PP2-A6 (AT5G45080), phloem protein 2-A6; PROPEP3 (AT5G64905), elicitor peptide 3 precursor